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dc.contributor.authorPenyalver, Ramón
dc.contributor.authorRoesch, Luis F. W.
dc.contributor.authorPiquer-Salcedo, Jaime E.
dc.contributor.authorForner-Giner, María A.
dc.contributor.authorAlguacil, María M.
dc.date.accessioned2022-06-23T07:17:20Z
dc.date.available2022-06-23T07:17:20Z
dc.date.issued2022es
dc.identifier.citationPenyalver, R., Roesch, L. F. W., Piquer-Salcedo, J. E., Forner-Giner, M. A. & del M Alguacil, M. (2022). From the bacterial citrus microbiome to the selection of potentially host-beneficial microbes. New Biotechnology, 70, 116-128.es
dc.identifier.issn1871-6784
dc.identifier.urihttp://hdl.handle.net/20.500.11939/8245
dc.description.abstractCitrus is the most cultivated fruit crop worldwide. The modern citrus industry needs new bioproducts to overcome phytopathological threats, tolerate stresses and increase yield and quality. Mutualistic microbes from roots significantly impact host physiology and health and are a potentially beneficial resource. The bacterial microbiome can be surveyed to select potentially host-beneficial microbes. To achieve this goal, a prevalent “core-citrus” bacterial microbiome was obtained by picking those operational taxonomic units (OTUs) shared among samples within and across two Citrus rootstock genotypes grown in the same soil for more than 20 years. A sub-selection of main OTUs from the defined "core-citrus" microbiome was made based on abundance, host-enriched versus bulk soil, and rhizosphere-indicator species. In parallel, an extensive census of the cultivable microbiota was performed to collect a large number of bacterial citrus isolates. Metataxonomic data were linked to cultured microbes, matching 16S rRNA gene sequences from bacterial isolates with those counterpart OTU reference sequences from the selected bacterial "core-citrus" microbiome. This approach allowed selection of potentially host-beneficial bacteria to mine for agricultural probiotics in future biotechnological applications required for the citrus industry.es
dc.language.isoenes
dc.publisherElsevieres
dc.rightsAtribución-NoComercial-SinDerivadas 3.0 España*
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/3.0/es/*
dc.subjectCitrus microbiomeses
dc.subjectMetataxonomicses
dc.subjectCulturomicses
dc.subjectRhizospheric bacteriaes
dc.subjectBeneficial bacteriaes
dc.subjectAgricultural probioticses
dc.titleFrom the bacterial citrus microbiome to the selection of potentially host-beneficial microbeses
dc.typearticlees
dc.authorAddressrpenal@ivia.eses
dc.entidadIVIACentro de Protección Vegetal y Biotecnologíaes
dc.identifier.doi10.1016/j.nbt.2022.06.002es
dc.identifier.urlhttps://www.sciencedirect.com/science/article/pii/S1871678422000395?via%3Dihubes
dc.journal.issueNumber70es
dc.journal.titleNew Biotechnologyes
dc.page.final128es
dc.page.initial116es
dc.relation.projectIDThis work was supported by grants RTA2015–00087-C2–01, AGL2017–91803-EXP and RTI2018–098379-R-I00 from Spanish Agency of Science (AEI, Spain) and co-funded by the European Social Fund to E. Marco-Noales, R. Penyalver and M.A. Forner-Giner, respectively.es
dc.relation.projectIDPart of this work was also conducted during a visiting stay of R. Penyalver at the Universidade Federal do Pampa (Unipampa), Sao Gabriel, RS. Brazil funded by the “Programa Movilidad” from AEI (Spain) PRX15/00253.es
dc.rights.accessRightsopenAccesses
dc.source.typeelectronicoes
dc.subject.agrisH20 Plant diseaseses
dc.subject.agrisU40 Surveying methodses
dc.subject.agrisF30 Plant genetics and breedinges
dc.subject.agrisA50 Agricultural researches
dc.subject.agrisP34 Soil biologyes
dc.type.hasVersionpublishedVersiones


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