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dc.contributor.authorRodriguez-Palenzuela, Pablo
dc.contributor.authorMatas, Isabel M.
dc.contributor.authorMurillo, Jesús
dc.contributor.authorLopez-Solanilla, Emilia
dc.contributor.authorBardaji, Leire
dc.contributor.authorPerez-Martinez, Isabel
dc.contributor.authorRodriguez-Moskera, Martin E.
dc.contributor.authorPenyalver, Ramón
dc.contributor.authorLópez, María M.
dc.contributor.authorQuesada, Jose M.
dc.contributor.authorBiehl, Bryan S.
dc.contributor.authorPerna, Nicole T.
dc.contributor.authorGlasner, Jeremy D.
dc.contributor.authorCabot, Eric L.
dc.contributor.authorNeeno-Eckwall, Eric
dc.contributor.authorRamos, Cayo
dc.date.accessioned2017-06-01T10:10:07Z
dc.date.available2017-06-01T10:10:07Z
dc.date.issued2010
dc.identifier.citationRodríguez‐Palenzuela, P., Matas, I. M., Murillo, J., López‐Solanilla, E., Bardaji, L., Pérez‐Martínez, I. et al. (2010). Annotation and overview of the Pseudomonas savastanoi pv. savastanoi NCPPB 3335 draft genome reveals the virulence gene complement of a tumour‐inducing pathogen of woody hosts. Environmental microbiology, 12(6), 1604-1620.
dc.identifier.issn1462-2912
dc.identifier.urihttp://hdl.handle.net/20.500.11939/4435
dc.description.abstractPseudomonas savastanoi pv. savastanoi is a tumour-inducing pathogen of Olea europaea L. causing oliveknot disease. Bioinformatic analysis of the draftgenome sequence of strain NCPPB 3335, whichencodes 5232 predicted coding genes on a totallength of 5856 998 bp and a 57.12% G + C, revealed alarge degree of conservation with Pseudomonassyringae pv. phaseolicola 1448A and P. syringae pv.tabaci 11528. However, NCPPB 3335 contains twelvevariable genomic regions, which are absent in all pre-viously sequenced P. syringae strains. Various fea-tures that could contribute to the ability of this strainto survive in a woody host were identified, includingbroad catabolic and transport capabilities for degrad-ing plant-derived aromatic compounds, the duplica-tion of sequences related to the biosynthesis of thephytohormone indoleacetic acid (iaaM, iaaH) and itsamino acid conjugate indoleacetic acid-lysine (iaaLgene), and the repertoire of strain-specific putativetype III secretion system effectors. Access to thisseventh genome sequence belonging to the ‘P. syrin-gae complex’ allowed us to identify 73 predictedcoding genes that are NCPPB 3335-specific. Resultsshown here provide the basis for detailed functionalanalysis of a tumour-inducing pathogen of woodyhosts and for the study of specific adaptations of a P.savastanoi pathovar.
dc.language.isoen
dc.titleAnnotation and overview of the Pseudomonas savastanoi pv. savastanoi NCPPB 3335 draft genome reveals the virulence gene complement of a tumour-inducing pathogen of woody hosts
dc.typearticle
dc.authorAddressInstituto Valenciano de Investigaciones Agrarias (IVIA), Carretera CV-315, Km. 10’7, 46113 Moncada (Valencia), Españaes
dc.date.issuedFreeFormJUN 2010
dc.entidadIVIACentro de Protección Vegetal y Biotecnología
dc.identifier.doi10.1111/j.1462-2920.2010.02207.x
dc.journal.abbreviatedTitleEnviron.Microbiol.
dc.journal.issueNumber6
dc.journal.titleEnvironmental microbiology
dc.journal.volumeNumber12
dc.page.final1620
dc.page.initial1604
dc.rights.accessRightsopenAccess
dc.source.typeImpreso


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